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EBF1
COLON - Expression summary
RNA expressioni
HPA:2.7TPM
GTEx:3.0RPKM
FANTOM5:24.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 2.7
overview Male, age 54 Sample 1
TPM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 3.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 12.8
Min RPKM: 0.5
Std RPKM: 1.9
Median RPKM: 3.1
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 12.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 10.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 9.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 8.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 8.4
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 7.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 7.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 7.3
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 7.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 6.5
Show all
Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 25.8
Min RPKM: 0.3
Std RPKM: 3.0
Median RPKM: 1.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 25.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 17.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 16.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 12.3
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 11.1
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 9.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 8.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 8.8
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 8.1
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 7.9
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 24.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 28.8
FF:10014-101C5 62,83,84 years, mixed 24.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.