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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 260.1
Min RPKM: 107.4
Std RPKM: 26.7
Median RPKM: 156.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
260.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
254.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
230.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
216.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
210.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
208.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
197.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
192.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
190.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
189.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
187.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
185.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
185.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
185.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
184.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
183.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
183.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
181.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
181.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
180.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
179.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
178.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
177.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
176.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
174.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
172.1
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
171.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
171.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
170.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
170.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
170.4
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
169.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
167.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
167.0
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
166.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
166.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
165.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
165.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
164.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
163.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
163.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
163.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
162.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
162.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
161.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
160.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
157.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
157.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
156.9
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
156.3
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
156.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
155.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
155.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
153.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
153.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
153.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
153.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
152.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
151.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
149.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
149.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
149.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
148.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
147.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
147.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
147.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
146.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
146.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
145.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
145.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
145.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
144.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
144.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
142.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
142.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
141.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
139.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
136.7
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
136.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
136.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
135.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
135.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
132.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
131.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
130.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
130.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
130.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
130.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
129.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
128.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
128.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
128.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
126.3
GTEX-11I78-1926-SM-59878
50-59 years, female
126.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
118.5
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
117.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
107.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.