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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 531.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 216.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 168.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 617.2
Min RPKM: 74.3
Std RPKM: 92.1
Median RPKM: 222.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
617.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
561.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
513.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
485.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
473.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
473.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
439.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
422.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
419.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
417.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
416.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
413.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
412.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
391.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
387.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
386.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
369.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
358.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
357.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
355.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
353.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
353.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
352.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
350.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
350.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
345.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
344.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
340.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
339.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
338.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
336.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
334.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
333.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
329.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
328.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
328.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
325.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
322.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
320.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
305.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
303.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
303.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
302.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
301.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
298.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
297.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
296.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
295.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
294.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
290.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
288.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
287.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
286.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
285.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
285.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
285.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
284.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
282.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
282.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
279.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
277.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
276.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
275.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
273.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
273.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
270.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
268.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
268.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
267.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
266.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
264.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
263.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
263.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
262.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
261.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
258.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
258.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
255.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
254.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
254.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
252.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
251.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
251.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
250.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
248.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
244.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
243.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
242.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
241.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
240.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
240.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
240.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
239.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
235.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
234.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
233.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
233.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
231.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
229.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
228.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
227.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
227.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
226.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
226.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
224.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
224.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
223.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
222.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
221.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
221.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
221.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
220.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
218.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
215.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
215.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
215.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
213.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
212.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
210.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
210.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
209.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
207.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
207.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
204.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
200.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
199.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
199.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
198.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
197.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
196.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
196.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
194.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
193.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
191.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
189.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
189.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
189.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
188.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
187.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
186.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
184.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
184.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
183.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
181.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
181.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
180.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
180.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
180.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
179.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
178.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
177.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
175.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
175.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
174.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
174.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
174.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
173.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
171.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
170.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
169.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
169.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
168.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
164.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
163.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
161.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
161.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
160.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
160.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
158.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
156.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
156.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
154.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
154.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
153.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
153.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
153.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
151.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
151.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
148.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
148.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
147.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
146.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
146.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
146.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
146.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
146.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
145.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
144.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
144.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
143.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
142.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
142.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
140.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
137.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
134.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
133.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
132.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
128.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
127.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
126.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
125.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
124.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
124.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
122.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
117.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
113.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
108.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
105.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
103.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
103.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
95.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
88.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
76.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
74.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.