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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 281.6
Min RPKM: 16.0
Std RPKM: 49.6
Median RPKM: 106.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
281.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
271.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
220.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
209.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
209.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
203.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
203.1
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
202.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
189.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
185.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
184.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
182.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
178.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
175.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
171.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
170.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
170.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
163.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
163.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
162.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
160.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
157.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
156.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
153.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
150.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
149.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
149.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
147.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
142.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
141.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
141.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
141.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
140.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
139.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
138.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
135.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
134.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
134.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
131.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
131.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
129.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
128.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
123.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
123.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
122.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
122.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
121.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
121.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
120.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
118.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
117.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
116.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
115.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
113.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
113.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
111.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
108.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
107.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
106.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
106.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
105.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
104.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
104.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
103.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
102.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
101.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
101.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
100.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
98.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
98.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
98.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
97.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
97.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
95.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
95.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
94.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
93.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
93.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
90.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
87.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
87.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
86.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
85.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
85.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
85.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
83.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
79.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
78.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
78.0
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
77.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
77.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
74.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
74.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
73.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
72.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
72.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
72.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
71.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
71.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
68.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
68.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
67.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
66.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
58.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
55.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
55.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
55.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
53.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
50.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
46.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
45.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
42.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
39.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
21.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
19.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
17.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
16.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.