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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 990.7
Min RPKM: 12.2
Std RPKM: 178.8
Median RPKM: 194.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
990.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
560.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
513.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
500.3
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
479.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
463.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
458.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
457.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
454.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
445.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
445.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
442.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
433.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
432.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
401.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
397.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
384.0
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
378.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
361.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
355.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
342.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
329.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
310.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
307.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
295.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
289.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
277.2
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
277.0
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
276.5
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
269.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
260.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
259.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
255.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
252.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
251.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
249.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
245.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
244.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
243.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
240.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
235.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
235.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
213.8
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
212.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
212.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
207.0
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
195.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
194.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
194.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
192.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
185.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
180.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
177.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
174.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
165.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
85.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
79.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
49.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
47.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
45.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
43.1
GTEX-S32W-1226-SM-4AD67
50-59 years, female
42.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
40.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
40.3
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
38.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
36.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
36.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
34.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
33.8
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
32.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
31.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
31.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
30.6
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
29.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
29.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
29.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
28.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
28.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
28.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
26.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
26.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
25.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
25.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
23.2
GTEX-11I78-1926-SM-59878
50-59 years, female
22.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
22.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
21.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
21.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
20.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
20.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
20.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
17.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
17.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
16.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
16.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
15.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
12.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.