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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 108.7
Min RPKM: 20.7
Std RPKM: 14.5
Median RPKM: 56.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
108.7
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
89.8
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
84.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
78.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
77.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
77.4
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
76.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
75.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
75.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
74.2
GTEX-ZTSS-0926-SM-59865
40-49 years, male
73.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
73.0
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
72.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
72.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
70.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
70.4
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
70.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
69.9
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
69.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
69.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
68.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
68.8
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
68.3
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
68.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
68.0
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
67.9
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
67.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
66.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
66.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
66.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
65.9
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
64.3
GTEX-13111-1426-SM-5DUW3
50-59 years, male
61.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
61.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
60.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
60.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
60.2
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
59.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
57.8
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
57.1
GTEX-111YS-1426-SM-5GID8
60-69 years, male
56.7
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
56.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
56.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
56.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
55.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
55.1
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
54.8
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
54.5
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
54.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
54.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
54.3
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
53.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
53.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
53.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
53.0
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
52.0
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
51.4
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
51.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
50.7
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
50.6
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
50.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
50.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
48.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
48.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
48.5
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
48.3
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
48.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
48.2
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
47.8
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
47.5
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
47.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
46.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
44.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
43.6
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
43.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
41.9
GTEX-117YX-0326-SM-5GICL
50-59 years, male
41.6
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
41.5
GTEX-1192X-2526-SM-59868
50-59 years, male
41.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
40.0
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
39.9
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
39.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
38.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
33.7
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
29.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
27.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
26.7
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
20.7
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
