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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 307.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 147.2
Min RPKM: 4.0
Std RPKM: 26.6
Median RPKM: 66.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
147.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
122.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
121.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
121.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
117.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
114.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
110.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
109.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
108.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
107.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
103.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
102.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
102.1
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
99.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
98.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
96.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
96.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
95.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
95.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
93.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
92.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
92.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
91.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
91.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
89.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
89.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
89.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
88.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
88.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
87.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
87.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
86.4
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
84.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
84.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
83.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
82.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
81.6
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
81.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
79.0
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
78.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
78.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
77.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
77.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
76.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
75.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
75.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
74.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
73.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
73.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
73.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
73.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
71.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
71.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
70.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
69.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
67.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
67.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
66.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
65.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
65.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
65.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
64.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
64.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
64.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
63.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
63.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
63.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
63.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
61.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
61.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
61.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
59.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
59.0
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
58.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
58.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
58.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
56.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
56.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
55.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
55.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
54.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
51.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
51.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
51.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
48.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
48.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
48.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
48.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
44.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
44.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
44.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
43.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
42.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
42.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
40.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
38.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
37.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
37.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
37.1
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
36.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
36.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
36.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
33.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
33.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
32.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
29.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
28.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
27.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
27.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
26.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
25.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
18.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
16.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
4.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 116.4
Samples: 108
Max RPKM: 216.7
Min RPKM: 17.7
Std RPKM: 49.4
Median RPKM: 123.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
216.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
216.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
215.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
206.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
201.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
192.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
191.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
182.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
181.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
179.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
177.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
176.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
175.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
174.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
171.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
171.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
165.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
164.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
163.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
162.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
162.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
161.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
159.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
159.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
156.3
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
154.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
152.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
146.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
146.1
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
143.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
142.2
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
141.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
140.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
138.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
138.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
138.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
137.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
137.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
136.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
135.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
133.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
132.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
132.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
131.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
130.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
130.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
130.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
129.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
128.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
127.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
125.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
124.9
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
124.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
123.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
122.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
122.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
121.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
120.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
120.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
119.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
118.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
117.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
115.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
114.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
114.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
112.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
110.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
106.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
105.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
102.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
101.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
99.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
99.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
96.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
94.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
92.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
88.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
88.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
87.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
84.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
83.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
81.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
80.4
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
79.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
78.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
70.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
66.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
60.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
59.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
57.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
56.0
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
55.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
54.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
47.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
43.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
42.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
41.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
41.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
41.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
35.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
35.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
29.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
27.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
25.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
22.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
21.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
19.5
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
17.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.