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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 152.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 198.9
Min RPKM: 8.8
Std RPKM: 36.3
Median RPKM: 59.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
198.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
187.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
183.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
176.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
169.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
163.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
158.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
152.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
146.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
144.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
142.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
137.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
137.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
136.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
131.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
127.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
123.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
122.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
120.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
115.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
110.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
105.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
102.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
101.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
101.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
100.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
100.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
100.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
98.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
94.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
94.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
94.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
93.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
93.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
93.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
92.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
91.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
90.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
90.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
90.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
89.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
88.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
87.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
87.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
86.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
86.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
85.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
84.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
84.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
84.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
84.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
83.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
82.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
81.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
81.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
80.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
80.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
80.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
80.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
79.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
79.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
78.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
78.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
78.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
77.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
77.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
74.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
72.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
72.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
71.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
71.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
71.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
70.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
68.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
68.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
67.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
67.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
66.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
66.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
66.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
65.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
65.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
65.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
65.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
65.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
65.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
65.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
65.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
65.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
64.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
64.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
64.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
63.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
63.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
63.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
62.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
62.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
62.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
61.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
61.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
61.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
60.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
60.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
60.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
59.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
59.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
59.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
59.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
58.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
58.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
58.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
58.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
58.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
58.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
57.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
57.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
56.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
55.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
55.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
54.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
53.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
53.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
52.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
52.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
51.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
51.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
51.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
51.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
51.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
51.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
50.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
50.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
50.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
50.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
49.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
49.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
48.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
48.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
47.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
46.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
46.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
46.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
44.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
43.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
43.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
43.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
42.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
42.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
41.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
41.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
40.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
40.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
40.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
40.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
39.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
38.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
38.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
38.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
37.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
36.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
35.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
34.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
34.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
34.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
34.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
33.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
33.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
32.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
32.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
32.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
32.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
31.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
31.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
31.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
31.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
30.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
30.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
30.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
30.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
29.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
28.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
28.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
28.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
27.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
27.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
27.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
26.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
26.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
26.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
26.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
25.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
25.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
25.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
24.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
24.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
23.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
23.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
23.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
23.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
22.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
21.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
20.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
19.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
19.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
19.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
19.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
19.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
18.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
17.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
15.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
15.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
12.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
10.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
8.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.