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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 123.4
Min RPKM: 6.5
Std RPKM: 26.4
Median RPKM: 39.3
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
123.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
119.0
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
94.4
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
91.4
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
90.9
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
86.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
85.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
84.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
83.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
82.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
80.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
80.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
79.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
78.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
77.0
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
76.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
75.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
74.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
72.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
72.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
71.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
71.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
69.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
68.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
67.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
65.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
62.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
62.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
60.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
58.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
57.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
57.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
56.8
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
54.9
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
54.3
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
54.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
54.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
49.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
48.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
48.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
47.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
47.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
46.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
45.2
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
44.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
43.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
42.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
40.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
38.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
37.7
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
37.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
36.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
35.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
35.0
GTEX-QCQG-1226-SM-48U23
50-59 years, female
35.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
32.7
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
32.6
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
32.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
32.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
31.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
30.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
29.2
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
28.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
28.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
28.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
28.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
28.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
28.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
27.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
27.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
26.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
25.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
25.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
24.4
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
23.0
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
22.8
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
22.8
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
22.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
22.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
21.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
18.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
18.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
17.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
16.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
16.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
15.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
15.2
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
14.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
11.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
11.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
10.4
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
10.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
8.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
8.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
6.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
6.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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