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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 127.9
Min RPKM: 33.2
Std RPKM: 21.2
Median RPKM: 65.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
127.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
123.6
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
121.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
113.7
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
105.9
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
102.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
101.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
101.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
99.6
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
99.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
98.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
95.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
95.8
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
95.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
94.9
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
94.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
93.7
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
93.2
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
93.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
92.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
83.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
83.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
83.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
82.7
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
81.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
80.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
78.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
78.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
78.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
77.4
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
76.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
75.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
75.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
71.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
71.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
70.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
70.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
70.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
70.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
69.5
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
69.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
69.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
69.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
68.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
67.7
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
66.0
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
65.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
65.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
65.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
65.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
64.9
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
64.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
63.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
60.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
59.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
59.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
58.5
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
57.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
57.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
56.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
56.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
56.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
56.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
55.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
55.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
55.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
54.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
54.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
54.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
54.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
53.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
53.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
52.5
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
52.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
52.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
52.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
51.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
51.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
50.8
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
49.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
49.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
47.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
47.5
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
47.4
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
46.9
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
46.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
44.3
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
43.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
42.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
41.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
40.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
40.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
36.9
GTEX-S341-1226-SM-4AD5S
40-49 years, female
35.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
35.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
33.2
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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