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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 155.7
Min RPKM: 16.1
Std RPKM: 25.5
Median RPKM: 48.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
155.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
144.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
128.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
120.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
112.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
109.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
106.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
106.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
104.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
96.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
93.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
90.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
85.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
82.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
79.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
75.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
74.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
74.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
71.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
70.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
69.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
68.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
68.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
67.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
64.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
63.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
62.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
62.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
61.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
61.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
60.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
60.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
59.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
59.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
59.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
58.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
58.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
58.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
57.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
57.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
57.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
57.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
56.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
53.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
53.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
52.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
52.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
51.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
51.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
50.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
50.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
50.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
50.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
50.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
50.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
49.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
49.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
49.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
48.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
48.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
47.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
47.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
47.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
46.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
46.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
46.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
45.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
45.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
44.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
44.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
44.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
44.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
44.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
43.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
43.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
43.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
42.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
42.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
40.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
39.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
39.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
39.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
37.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
37.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
37.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
37.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
37.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
37.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
36.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
35.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
35.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
35.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
34.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
34.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
34.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
34.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
34.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
34.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
32.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
31.7
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
31.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
30.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
30.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
29.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
29.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
29.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
28.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
25.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
25.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
24.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
24.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
24.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
24.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
22.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
20.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
20.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
16.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.