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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 165.5
Min RPKM: 4.1
Std RPKM: 35.6
Median RPKM: 58.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
165.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
154.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
142.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
140.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
121.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
117.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
113.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
111.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
109.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
107.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
107.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
105.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
104.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
104.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
104.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
102.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
100.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
99.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
98.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
96.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
95.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
95.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
93.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
93.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
92.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
90.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
89.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
88.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
88.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
87.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
85.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
85.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
85.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
82.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
81.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
81.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
81.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
79.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
78.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
78.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
77.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
77.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
76.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
74.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
72.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
71.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
69.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
69.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
67.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
67.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
66.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
66.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
66.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
65.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
61.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
61.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
60.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
59.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
58.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
58.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
56.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
56.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
54.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
52.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
49.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
48.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
46.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
46.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
46.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
46.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
45.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
44.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
43.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
42.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
42.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
42.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
41.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
39.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
38.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
37.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
36.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
35.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
33.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
32.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
32.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
31.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
31.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
31.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
31.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
30.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
29.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
29.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
26.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
26.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
23.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
22.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
21.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
21.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
19.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
19.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
17.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
17.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
16.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
15.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
15.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
14.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
14.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
13.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
13.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
12.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
12.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
11.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
10.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
8.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
8.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
6.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
4.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.