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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3253.0
Min RPKM: 27.5
Std RPKM: 448.4
Median RPKM: 194.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
3253.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
2419.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
2112.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
1310.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
939.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
836.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
596.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
578.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
559.6
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
549.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
547.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
537.2
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
524.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
488.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
467.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
466.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
464.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
444.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
439.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
428.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
414.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
398.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
398.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
394.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
387.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
345.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
344.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
335.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
326.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
319.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
318.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
311.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
309.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
306.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
305.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
303.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
267.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
265.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
256.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
255.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
244.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
244.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
241.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
241.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
234.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
228.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
217.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
215.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
209.9
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
207.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
205.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
195.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
193.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
193.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
191.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
186.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
178.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
174.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
170.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
168.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
161.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
156.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
155.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
155.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
154.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
154.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
150.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
149.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
149.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
147.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
147.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
144.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
141.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
140.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
133.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
133.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
127.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
122.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
121.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
109.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
109.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
101.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
93.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
88.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
87.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
84.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
79.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
75.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
70.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
67.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
66.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
62.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
60.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
53.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
53.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
53.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
49.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
49.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
47.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
46.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
45.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
32.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
27.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
27.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.