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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 18475.1
Min RPKM: 558.8
Std RPKM: 2714.9
Median RPKM: 2605.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
18475.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
14178.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
13808.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
8404.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
7385.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
7350.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
7180.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
6600.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
6422.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
5965.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
5698.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
5280.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
5243.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
5135.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
4991.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
4956.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
4874.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
4736.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
4723.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
4470.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
4247.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
4091.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
4090.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
4018.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
3899.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
3878.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
3865.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
3721.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
3721.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
3663.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
3417.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
3383.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
3338.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
3143.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
3128.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
3118.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
3097.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
3072.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
2984.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
2980.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
2928.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
2876.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
2827.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
2805.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
2798.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
2797.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
2780.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
2774.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
2681.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
2652.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
2649.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
2643.2
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
2566.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
2536.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
2518.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
2485.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
2408.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
2404.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
2355.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
2350.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
2348.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
2268.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
2180.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
2125.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
2097.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
2094.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
2046.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
1897.3
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
1826.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1689.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
1679.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1665.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
1664.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1621.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
1595.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
1584.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
1582.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
1556.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1530.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1519.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
1454.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
1448.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
1413.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
1379.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
1363.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1356.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
1345.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1246.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
1234.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1215.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1174.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
1173.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
1143.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1096.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
1091.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
1060.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
877.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
876.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
866.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
839.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
790.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
786.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
625.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
558.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.