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VPS72
COLON - Expression summary
RNA expressioni
HPA:17.6TPM
GTEx:17.1RPKM
FANTOM5:34.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 17.6
overview Male, age 54 Sample 1
TPM: 18
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 19.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 17.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 19.1
Samples: 149

Max RPKM: 25.8
Min RPKM: 10.4
Std RPKM: 3.1
Median RPKM: 18.9
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 25.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 25.8
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 25.6
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 25.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 25.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 24.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 24.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 24.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 24.5
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 24.4
Show all
Colon - Transverse
RPKM: 15.6
Samples: 196

Max RPKM: 26.1
Min RPKM: 6.3
Std RPKM: 3.0
Median RPKM: 15.3
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 26.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 23.5
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 22.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 22.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 22.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 22.0
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 21.9
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 21.3
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 21.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 20.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 34.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 30.1
FF:10014-101C5 62,83,84 years, mixed 34.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.