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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 386.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 112.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 105.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 349.4
Min RPKM: 0.5
Std RPKM: 48.1
Median RPKM: 31.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
349.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
233.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
203.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
178.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
166.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
165.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
159.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
158.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
157.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
138.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
134.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
130.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
129.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
128.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
125.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
121.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
109.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
108.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
107.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
106.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
106.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
104.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
97.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
97.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
94.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
94.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
93.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
91.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
90.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
89.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
89.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
87.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
86.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
84.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
84.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
80.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
79.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
78.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
77.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
76.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
76.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
75.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
75.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
75.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
74.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
73.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
71.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
69.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
68.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
67.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
67.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
66.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
65.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
64.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
62.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
60.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
57.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
57.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
57.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
57.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
57.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
56.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
55.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
54.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
53.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
53.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
52.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
52.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
51.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
51.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
51.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
51.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
50.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
48.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
48.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
47.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
46.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
46.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
45.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
44.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
43.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
43.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
42.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
42.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
42.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
42.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
39.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
39.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
38.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
38.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
37.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
37.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
36.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
35.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
34.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
34.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
33.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
33.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
33.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
32.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
32.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
31.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
31.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
31.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
31.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
31.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
31.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
30.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
30.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
29.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
29.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
28.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
27.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
26.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
26.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
25.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
24.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
24.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
23.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
22.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
20.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
20.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
19.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
18.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
18.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
18.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
18.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
17.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
17.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
16.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
16.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
16.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
16.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
15.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
15.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
14.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
14.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
14.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
14.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
13.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
13.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
12.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
12.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
12.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
12.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
12.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
11.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
11.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
11.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
11.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
11.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
10.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
9.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
9.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
9.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
8.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
8.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
8.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
8.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
8.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
8.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
8.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
7.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
7.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
7.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
7.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
7.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
7.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
6.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
6.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
6.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
6.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
5.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
5.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
5.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
4.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
4.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
4.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
4.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
4.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
4.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
4.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
4.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
3.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
3.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
3.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
3.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
3.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
3.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
3.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
3.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
3.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
3.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
3.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
3.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
2.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
2.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
2.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
2.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
2.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
2.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
1.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
1.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
1.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
1.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
1.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
1.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
1.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
1.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
0.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
0.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.