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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 549.2
Min RPKM: 96.3
Std RPKM: 97.0
Median RPKM: 286.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
549.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
529.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
504.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
477.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
472.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
460.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
434.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
434.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
430.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
424.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
420.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
416.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
409.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
396.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
389.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
388.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
385.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
381.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
375.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
373.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
373.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
371.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
364.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
358.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
356.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
353.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
347.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
343.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
337.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
337.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
334.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
333.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
332.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
332.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
323.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
322.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
322.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
322.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
315.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
303.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
302.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
295.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
294.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
291.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
289.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
287.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
286.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
285.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
285.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
285.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
284.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
283.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
276.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
274.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
271.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
270.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
269.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
268.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
263.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
262.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
256.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
255.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
250.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
242.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
236.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
233.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
231.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
229.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
228.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
222.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
221.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
217.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
216.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
214.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
212.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
206.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
204.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
202.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
200.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
196.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
195.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
194.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
191.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
186.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
175.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
167.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
154.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
153.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
150.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
130.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
128.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
114.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
106.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
96.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.