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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 565.9
Min RPKM: 192.7
Std RPKM: 69.4
Median RPKM: 310.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
565.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
520.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
467.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
466.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
435.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
431.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
428.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
427.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
413.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
403.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
398.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
398.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
398.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
396.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
385.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
385.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
383.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
382.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
382.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
379.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
375.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
374.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
372.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
371.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
362.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
359.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
351.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
350.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
349.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
348.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
347.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
347.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
339.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
338.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
335.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
334.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
334.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
333.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
330.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
329.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
328.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
326.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
326.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
324.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
323.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
323.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
323.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
321.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
321.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
319.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
317.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
317.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
316.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
315.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
312.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
312.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
311.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
310.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
310.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
308.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
307.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
306.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
304.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
303.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
302.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
299.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
296.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
294.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
292.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
292.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
287.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
287.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
286.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
284.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
284.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
283.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
282.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
280.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
273.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
273.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
272.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
269.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
267.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
264.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
264.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
263.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
262.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
260.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
256.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
256.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
254.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
253.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
249.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
247.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
244.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
242.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
240.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
239.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
238.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
235.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
234.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
233.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
231.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
229.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
227.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
224.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
219.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
219.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
217.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
215.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
214.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
205.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
205.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
202.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
200.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
198.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
192.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.