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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 443.0
Min RPKM: 111.3
Std RPKM: 66.8
Median RPKM: 289.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
443.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
423.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
419.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
412.9
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
409.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
384.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
380.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
377.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
374.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
373.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
368.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
366.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
366.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
365.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
358.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
357.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
354.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
352.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
351.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
350.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
348.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
346.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
344.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
343.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
342.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
341.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
337.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
331.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
331.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
327.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
327.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
323.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
321.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
321.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
321.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
320.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
319.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
319.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
314.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
307.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
307.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
304.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
304.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
304.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
300.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
299.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
298.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
297.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
297.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
296.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
290.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
289.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
289.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
289.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
287.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
286.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
285.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
284.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
281.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
278.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
278.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
275.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
274.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
268.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
266.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
263.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
261.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
260.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
259.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
258.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
257.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
256.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
253.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
252.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
251.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
251.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
250.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
247.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
247.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
244.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
244.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
242.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
241.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
231.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
221.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
218.7
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
216.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
216.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
208.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
207.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
203.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
203.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
198.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
193.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
192.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
183.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
178.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
176.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
174.6
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
170.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
167.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
158.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
151.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
111.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.