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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 157.3
Min RPKM: 1.0
Std RPKM: 39.8
Median RPKM: 46.4
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
157.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
147.1
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
140.1
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
139.0
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
129.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
125.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
119.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
109.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
106.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
104.1
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
101.8
GTEX-111YS-1426-SM-5GID8
60-69 years, male
100.0
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
100.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
98.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
97.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
97.5
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
96.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
94.0
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
93.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
90.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
89.0
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
88.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
86.8
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
81.6
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
80.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
79.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
79.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
76.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
75.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
74.9
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
66.9
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
66.2
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
64.7
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
62.0
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
61.8
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
61.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
60.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
58.1
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
56.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
54.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
52.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
50.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
50.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
46.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
46.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
45.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
44.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
43.4
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
42.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
42.0
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
40.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
40.4
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
40.0
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
38.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
36.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
35.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
35.0
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
32.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
30.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
30.8
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
30.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
29.0
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
29.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
28.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
27.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
24.8
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
20.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
20.0
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
18.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
15.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
13.3
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
13.1
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
12.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
12.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
8.1
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
7.3
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
4.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
4.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
4.0
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
4.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
2.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
2.7
GTEX-1192X-2526-SM-59868
50-59 years, male
2.3
GTEX-117YX-0326-SM-5GICL
50-59 years, male
2.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
2.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
1.8
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
1.4
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
