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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 39
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 15.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 18.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 37.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 36
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 61
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 25.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 101.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 176.8
Min RPKM: 4.2
Std RPKM: 31.6
Median RPKM: 50.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
176.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
147.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
122.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
118.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
118.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
116.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
112.0
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
108.8
GTEX-R53T-0326-SM-48FEC
50-59 years, female
106.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
106.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
105.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
105.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
103.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
99.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
97.3
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
94.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
94.8
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
94.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
90.9
GTEX-P78B-1326-SM-3P611
40-49 years, female
90.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
85.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
84.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
84.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
79.2
GTEX-11GSP-0626-SM-5986T
60-69 years, female
76.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
73.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
73.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
72.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
71.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
70.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
69.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
69.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
68.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
68.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
68.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
68.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
67.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
66.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
66.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
64.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
63.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
61.6
GTEX-Q734-0326-SM-48U15
40-49 years, female
61.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
60.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
60.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
58.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
58.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
57.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
56.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
56.3
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
56.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
55.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
55.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
54.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
54.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
54.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
54.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
53.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
53.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
50.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
49.6
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
49.5
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
49.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
48.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
48.0
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
46.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
46.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
45.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
45.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
44.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
44.2
GTEX-RU72-1426-SM-46MUF
50-59 years, female
43.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
43.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
42.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
42.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
42.0
GTEX-13112-1426-SM-5EGH8
50-59 years, male
41.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
39.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
39.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
39.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
38.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
37.5
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
36.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
34.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
34.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
33.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
32.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
32.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
32.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
32.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
32.0
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
28.9
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
28.9
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
28.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
28.3
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
27.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
27.7
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
27.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
26.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
26.3
GTEX-S32W-1926-SM-4AD63
50-59 years, female
25.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
25.4
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
23.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
23.4
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
20.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
20.0
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
19.5
GTEX-1399T-0826-SM-5IFES
60-69 years, male
19.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
18.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
18.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
14.1
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
14.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
13.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
13.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
12.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
11.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
10.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
9.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
4.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
