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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 74.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 91.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 99.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 101.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 118.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 92.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 152.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 115.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 133.9
Min RPKM: 0.1
Std RPKM: 32.5
Median RPKM: 40.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
133.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
131.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
121.0
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
120.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
117.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
106.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
104.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
102.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
99.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
99.1
GTEX-RU72-1426-SM-46MUF
50-59 years, female
98.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
92.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
87.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
86.0
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
85.4
GTEX-QESD-2026-SM-447BI
20-29 years, male
84.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
83.0
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
82.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
82.8
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
81.5
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
80.7
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
80.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
79.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
77.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
77.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
77.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
74.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
73.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
70.7
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
65.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
64.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
64.4
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
63.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
62.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
61.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
60.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
58.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
58.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
57.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
56.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
55.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
54.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
54.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
52.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
51.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
51.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
50.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
50.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
49.7
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
48.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
48.4
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
48.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
46.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
46.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
45.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
45.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
43.4
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
42.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
41.5
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
40.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
40.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
39.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
38.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
36.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
34.8
GTEX-13113-1326-SM-5GCOI
60-69 years, female
34.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
33.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
33.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
32.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
30.5
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
29.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
29.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
28.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
27.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
27.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
27.7
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
27.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
27.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
26.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
26.4
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
24.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
23.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
23.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
22.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
21.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
21.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
21.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
21.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
20.7
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
20.6
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
17.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
16.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
16.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
16.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
15.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
14.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
13.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
12.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
11.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
11.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
11.0
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
10.3
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
10.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
10.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
10.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
8.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
8.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
7.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
7.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
6.6
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
6.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
5.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
4.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
3.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
3.6
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
2.6
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
2.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
1.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
0.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
