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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 859.2
Min RPKM: 265.2
Std RPKM: 128.4
Median RPKM: 433.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
859.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
778.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
775.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
770.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
763.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
758.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
751.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
732.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
731.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
678.3
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
661.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
628.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
604.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
601.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
601.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
600.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
587.6
GTEX-RU72-2226-SM-46MUE
50-59 years, female
583.8
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
575.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
546.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
543.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
539.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
532.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
532.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
530.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
525.5
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
514.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
498.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
496.4
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
495.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
489.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
486.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
485.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
483.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
480.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
479.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
469.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
465.1
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
464.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
461.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
461.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
461.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
459.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
455.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
449.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
447.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
435.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
433.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
433.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
429.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
429.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
428.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
426.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
425.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
425.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
425.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
420.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
418.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
416.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
412.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
410.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
406.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
404.7
GTEX-QCQG-1426-SM-48U22
50-59 years, female
404.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
404.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
399.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
397.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
395.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
386.2
GTEX-11I78-1926-SM-59878
50-59 years, female
385.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
382.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
382.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
382.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
380.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
380.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
377.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
376.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
376.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
375.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
372.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
356.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
355.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
354.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
353.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
349.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
342.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
338.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
335.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
331.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
318.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
315.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
315.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
312.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
299.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
298.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
277.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
265.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.