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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 12.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 27.3
Min RPKM: 1.2
Std RPKM: 5.2
Median RPKM: 6.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
27.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
26.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
25.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
25.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
22.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
21.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
21.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
20.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
19.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
19.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
19.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
18.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
18.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
18.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
18.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
18.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
17.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
17.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
16.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
15.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
15.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
15.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
14.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
14.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
14.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
14.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
13.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
13.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
13.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
13.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
13.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
13.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
13.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
12.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
12.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
12.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
12.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
12.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
11.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
11.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
11.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
11.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
11.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
11.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
11.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
11.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
11.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
11.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
11.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
10.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
10.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
10.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
10.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
10.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
10.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
9.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
9.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
9.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
9.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
9.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
9.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
9.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
9.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
9.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
8.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
8.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
8.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
8.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
8.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
8.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
8.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
8.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
8.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
8.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
8.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
7.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
7.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
7.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
7.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
7.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
7.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
7.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
7.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
7.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
7.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
7.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
7.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
7.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
7.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
7.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
7.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
7.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
7.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
7.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
6.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
6.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
6.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
6.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
6.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
6.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
6.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
6.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
6.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
6.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
6.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
6.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
6.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
6.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
6.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
6.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
6.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
6.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
6.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
6.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
5.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
5.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
5.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
5.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
5.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
5.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
5.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
5.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
5.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
5.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
5.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
5.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
5.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
5.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
5.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
5.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
5.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
5.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
5.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
5.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
5.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
5.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
5.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
5.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
5.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
5.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
4.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
4.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
4.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
4.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
4.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
4.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
4.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
4.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
4.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
4.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
4.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
4.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
4.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
4.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
4.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
4.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
4.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
4.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
4.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
4.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
4.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
4.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
4.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
4.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
4.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
4.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
3.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
3.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
3.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
3.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
3.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
3.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
3.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
3.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
3.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
3.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
3.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
3.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
3.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
3.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
3.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
3.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
3.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
3.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
3.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
3.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
2.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
2.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
2.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
2.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
2.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
2.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
2.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
2.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
2.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
2.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
2.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
2.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
2.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
2.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
2.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
2.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
2.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
2.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
2.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
2.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
2.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
2.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
1.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
1.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.