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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 222.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 269.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 96.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 279.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 308.4
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 193.6
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 49
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 140
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 98.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 382.0
Min RPKM: 64.3
Std RPKM: 70.8
Median RPKM: 224.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
382.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
373.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
359.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
357.1
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
353.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
353.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
351.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
350.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
339.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
338.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
334.1
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
333.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
333.3
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
324.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
320.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
317.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
316.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
314.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
312.2
GTEX-REY6-0126-SM-48FDT
60-69 years, male
312.0
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
309.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
307.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
305.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
304.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
300.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
300.6
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
300.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
300.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
298.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
296.2
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
293.7
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
293.5
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
292.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
289.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
288.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
285.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
285.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
283.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
282.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
282.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
280.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
279.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
277.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
268.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
265.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
264.4
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
263.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
262.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
260.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
259.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
256.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
255.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
253.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
251.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
249.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
248.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
247.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
247.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
245.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
245.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
243.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
243.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
242.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
242.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
242.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
242.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
241.1
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
240.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
240.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
238.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
238.3
GTEX-QLQW-1026-SM-447A9
30-39 years, male
237.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
237.6
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
237.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
236.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
234.1
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
232.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
231.0
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
230.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
229.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
228.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
227.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
225.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
224.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
224.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
224.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
223.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
222.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
222.0
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
221.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
220.0
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
219.4
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
217.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
216.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
216.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
215.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
214.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
213.9
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
213.0
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
211.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
210.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
209.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
209.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
209.3
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
209.3
GTEX-V955-1926-SM-4KL1L
60-69 years, male
209.0
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
208.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
208.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
204.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
204.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
203.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
202.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
201.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
200.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
200.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
196.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
195.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
194.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
194.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
193.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
193.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
190.5
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
189.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
186.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
185.2
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
183.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
183.4
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
183.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
183.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
175.4
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
175.3
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
175.3
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
174.5
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
169.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
168.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
168.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
168.2
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
165.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
162.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
161.8
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
157.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
156.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
153.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
145.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
142.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
141.3
GTEX-XPT6-1626-SM-4B655
20-29 years, male
135.4
GTEX-RN64-2326-SM-48FDW
50-59 years, male
135.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
131.8
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
130.7
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
119.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
118.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
118.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
115.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
113.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
112.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
111.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
107.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
107.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
104.5
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
102.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
101.7
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
101.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
100.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
98.4
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
97.7
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
96.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
91.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
89.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
85.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
69.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
64.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.