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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 699.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 248.6
Min RPKM: 62.4
Std RPKM: 44.3
Median RPKM: 168.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
248.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
242.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
239.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
234.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
230.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
219.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
216.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
216.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
216.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
213.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
212.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
212.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
211.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
210.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
209.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
209.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
208.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
207.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
206.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
204.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
203.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
203.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
202.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
200.7
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
198.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
198.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
198.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
197.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
197.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
193.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
193.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
193.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
190.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
189.5
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
188.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
186.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
186.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
185.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
182.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
181.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
180.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
180.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
180.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
180.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
179.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
179.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
178.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
177.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
176.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
175.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
175.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
174.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
173.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
171.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
171.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
168.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
168.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
167.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
167.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
166.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
165.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
164.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
163.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
162.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
159.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
157.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
156.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
156.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
156.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
154.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
151.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
151.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
149.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
146.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
142.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
140.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
138.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
137.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
137.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
135.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
135.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
133.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
130.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
128.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
126.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
126.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
121.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
121.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
119.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
116.9
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
116.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
115.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
113.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
109.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
107.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
107.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
106.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
103.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
102.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
102.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
100.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
97.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
95.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
93.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
92.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
91.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
87.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
87.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
83.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
76.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
75.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
72.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
67.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
62.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 158.4
Samples: 108
Max RPKM: 253.9
Min RPKM: 46.1
Std RPKM: 53.2
Median RPKM: 172.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
253.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
242.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
236.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
235.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
234.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
234.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
232.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
228.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
224.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
224.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
222.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
221.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
219.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
219.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
218.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
215.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
215.8
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
215.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
213.9
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
209.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
209.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
209.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
208.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
207.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
204.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
203.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
201.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
198.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
194.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
193.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
193.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
191.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
191.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
191.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
188.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
188.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
187.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
186.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
186.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
185.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
185.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
184.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
184.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
183.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
181.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
179.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
177.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
177.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
177.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
175.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
175.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
172.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
172.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
172.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
172.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
171.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
169.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
168.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
167.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
167.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
161.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
159.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
158.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
158.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
157.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
156.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
156.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
149.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
145.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
133.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
131.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
129.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
128.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
127.9
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
127.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
125.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
125.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
123.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
120.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
119.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
119.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
117.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
109.9
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
104.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
103.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
103.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
103.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
101.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
96.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
95.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
92.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
89.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
88.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
86.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
85.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
84.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
83.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
75.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
74.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
71.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
70.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
65.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
64.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
59.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
57.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
54.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
52.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
46.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.