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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 297.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 371
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 127.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 307.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 325.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 213.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 37.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 189.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 101.1
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 440.9
Min RPKM: 81.8
Std RPKM: 77.3
Median RPKM: 264.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
440.9
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
418.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
412.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
404.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
398.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
396.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
396.3
GTEX-13112-0226-SM-5P9IV
50-59 years, male
393.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
384.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
383.6
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
379.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
371.8
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
365.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
363.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
361.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
356.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
348.1
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
345.3
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
344.3
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
344.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
343.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
341.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
340.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
339.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
338.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
337.8
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
337.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
337.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
336.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
335.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
334.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
332.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
328.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
328.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
326.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
325.7
GTEX-117XS-2026-SM-5GID1
60-69 years, male
324.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
321.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
318.9
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
316.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
316.6
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
313.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
312.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
311.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
308.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
308.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
305.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
305.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
305.5
GTEX-S95S-1126-SM-4B64E
60-69 years, male
305.3
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
304.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
303.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
303.2
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
298.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
298.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
298.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
295.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
294.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
292.8
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
292.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
291.4
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
290.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
289.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
288.3
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
288.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
287.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
284.9
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
284.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
283.6
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
282.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
281.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
279.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
279.8
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
279.5
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
279.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
278.9
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
278.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
277.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
274.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
274.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
271.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
270.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
269.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
268.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
268.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
264.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
263.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
263.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
262.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
259.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
259.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
258.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
257.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
256.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
255.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
254.9
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
254.3
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
254.2
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
252.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
252.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
251.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
251.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
250.6
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
249.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
249.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
249.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
248.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
248.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
248.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
247.4
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
243.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
242.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
237.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
235.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
234.6
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
231.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
230.7
GTEX-R55D-0126-SM-48FEL
50-59 years, male
229.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
227.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
225.2
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
224.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
222.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
219.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
215.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
215.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
213.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
213.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
210.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
209.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
208.1
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
207.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
205.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
201.4
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
198.5
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
197.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
197.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
197.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
196.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
190.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
189.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
188.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
187.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
185.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
184.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
180.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
175.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
174.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
170.1
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
160.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
157.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
152.9
GTEX-XPT6-1626-SM-4B655
20-29 years, male
151.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
151.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
150.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
149.6
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
143.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
142.1
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
135.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
128.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
123.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
121.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
119.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
117.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
114.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
109.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
106.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
101.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
100.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
100.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
95.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
89.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
81.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.