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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 376.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 470.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 475.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 217.1
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 367.1
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 306.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 9.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 57.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 19.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 484.3
Min RPKM: 184.0
Std RPKM: 36.7
Median RPKM: 274.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
484.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
417.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
366.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
360.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
354.0
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
347.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
345.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
343.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
341.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
338.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
337.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
331.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
328.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
327.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
323.8
GTEX-13112-0226-SM-5P9IV
50-59 years, male
323.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
321.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
319.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
319.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
316.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
313.5
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
311.9
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
311.7
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
311.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
309.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
309.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
306.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
306.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
305.7
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
304.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
301.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
301.7
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
301.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
301.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
301.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
301.0
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
300.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
300.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
298.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
297.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
295.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
294.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
294.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
294.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
293.9
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
292.4
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
292.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
291.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
291.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
290.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
290.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
288.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
288.1
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
287.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
287.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
286.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
285.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
285.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
285.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
284.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
283.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
283.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
283.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
283.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
283.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
282.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
282.0
GTEX-11OF3-1826-SM-5987N
60-69 years, male
281.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
281.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
281.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
280.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
279.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
279.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
279.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
279.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
278.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
278.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
278.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
278.0
GTEX-REY6-0126-SM-48FDT
60-69 years, male
277.9
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
277.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
276.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
276.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
275.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
275.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
274.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
274.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
274.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
273.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
272.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
271.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
271.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
271.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
270.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
269.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
269.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
269.7
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
269.2
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
268.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
267.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
267.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
267.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
267.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
263.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
263.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
263.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
263.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
263.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
263.3
GTEX-R55C-1426-SM-48FED
40-49 years, male
260.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
260.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
259.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
259.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
258.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
258.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
258.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
258.6
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
258.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
258.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
258.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
257.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
257.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
257.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
256.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
256.1
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
255.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
255.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
254.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
254.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
253.4
GTEX-RN64-2326-SM-48FDW
50-59 years, male
252.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
252.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
251.8
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
251.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
251.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
251.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
250.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
249.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
249.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
248.6
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
248.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
248.0
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
247.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
246.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
246.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
245.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
245.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
244.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
243.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
243.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
242.8
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
242.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
240.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
240.0
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
238.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
238.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
238.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
237.5
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
236.7
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
236.0
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
230.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
229.4
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
227.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
226.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
225.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
223.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
221.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
221.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
217.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
213.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
204.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
184.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.