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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 252.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 231.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 137.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2393.3
Min RPKM: 348.1
Std RPKM: 257.7
Median RPKM: 733.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2393.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1468.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1461.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1446.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1396.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1380.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1344.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1289.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1279.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1226.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1221.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1200.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1200.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
1192.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1189.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1183.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1167.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1142.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1131.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1124.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1112.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1104.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1104.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1102.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1102.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1084.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1038.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1027.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1026.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1024.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1003.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1003.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
985.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
983.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
963.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
953.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
948.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
940.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
935.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
922.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
910.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
904.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
900.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
896.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
894.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
893.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
892.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
892.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
890.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
888.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
888.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
881.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
877.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
874.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
867.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
859.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
857.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
857.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
853.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
852.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
848.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
844.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
844.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
843.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
842.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
841.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
837.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
835.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
830.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
820.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
818.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
815.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
811.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
806.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
805.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
798.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
797.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
796.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
794.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
788.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
785.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
783.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
782.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
778.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
776.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
776.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
776.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
773.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
770.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
768.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
767.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
766.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
765.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
761.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
760.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
757.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
755.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
753.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
753.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
752.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
751.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
751.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
747.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
746.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
742.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
738.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
735.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
730.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
729.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
726.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
719.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
718.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
716.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
713.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
706.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
705.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
704.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
700.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
695.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
694.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
691.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
690.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
684.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
680.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
679.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
674.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
669.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
667.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
666.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
664.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
663.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
661.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
654.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
654.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
650.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
650.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
644.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
642.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
641.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
637.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
632.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
631.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
628.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
628.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
627.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
625.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
623.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
623.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
623.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
619.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
608.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
608.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
602.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
602.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
592.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
590.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
590.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
590.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
588.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
581.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
579.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
575.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
568.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
567.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
566.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
562.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
560.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
559.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
558.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
557.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
552.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
550.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
549.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
548.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
546.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
546.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
544.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
538.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
531.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
531.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
529.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
529.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
528.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
527.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
522.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
513.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
510.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
509.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
502.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
499.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
493.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
489.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
488.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
488.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
478.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
478.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
473.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
473.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
465.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
464.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
456.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
456.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
454.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
446.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
439.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
423.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
410.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
406.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
403.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
377.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
367.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
364.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
361.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
348.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.