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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 191.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 27.1
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 36.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 92.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 78.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 128.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 75.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 50.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 428.3
Min RPKM: 19.9
Std RPKM: 51.6
Median RPKM: 84.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
428.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
234.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
212.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
207.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
194.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
193.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
186.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
182.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
177.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
163.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
157.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
155.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
147.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
139.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
134.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
132.9
GTEX-13112-1426-SM-5EGH8
50-59 years, male
131.6
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
131.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
124.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
122.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
121.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
119.0
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
118.7
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
118.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
114.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
114.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
113.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
112.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
112.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
111.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
111.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
111.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
110.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
108.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
108.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
107.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
107.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
106.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
105.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
105.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
105.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
102.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
101.6
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
98.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
97.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
96.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
95.6
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
94.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
93.5
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
92.2
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
92.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
90.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
90.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
89.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
88.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
87.0
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
86.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
85.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
84.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
84.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
83.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
81.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
81.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
80.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
79.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
79.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
79.3
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
79.3
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
79.2
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
79.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
79.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
78.4
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
76.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
75.4
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
75.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
74.8
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
74.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
72.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
72.2
GTEX-X261-1726-SM-4PQYT
50-59 years, male
72.1
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
71.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
71.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
71.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
70.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
69.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
68.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
68.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
65.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
64.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
64.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
63.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
62.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
60.6
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
60.2
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
60.0
GTEX-12696-0826-SM-5EGGE
60-69 years, male
58.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
57.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
56.6
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
53.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
53.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
51.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
50.8
GTEX-QESD-2026-SM-447BI
20-29 years, male
50.5
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
50.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
48.2
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
47.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
47.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
45.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
45.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
40.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
40.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
34.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
33.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
32.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
31.2
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
29.7
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
29.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
25.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
19.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.