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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1298.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2296.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 569.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3482.8
Min RPKM: 0.3
Std RPKM: 477.4
Median RPKM: 201.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
3482.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
2323.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
2083.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1790.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1645.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1600.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
1547.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1498.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1471.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
1361.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1351.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1320.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
1299.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1242.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
1231.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1223.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1205.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
1137.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1123.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1083.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1074.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1015.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
904.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
899.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
848.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
820.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
807.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
796.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
754.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
732.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
732.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
725.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
719.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
711.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
694.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
668.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
665.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
649.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
638.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
628.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
625.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
622.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
585.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
574.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
558.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
555.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
536.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
527.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
523.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
522.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
521.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
519.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
504.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
489.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
484.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
475.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
466.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
452.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
444.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
424.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
420.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
420.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
419.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
417.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
408.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
408.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
394.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
390.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
389.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
386.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
380.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
364.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
363.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
357.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
356.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
352.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
337.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
327.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
325.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
318.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
318.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
313.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
310.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
305.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
301.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
294.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
291.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
283.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
279.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
279.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
274.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
269.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
269.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
263.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
261.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
252.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
252.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
251.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
244.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
240.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
239.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
237.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
218.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
215.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
211.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
208.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
202.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
200.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
186.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
183.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
180.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
175.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
174.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
169.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
159.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
159.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
157.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
154.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
152.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
143.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
141.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
135.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
133.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
131.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
127.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
117.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
113.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
110.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
105.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
103.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
101.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
95.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
92.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
89.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
88.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
87.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
86.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
85.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
80.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
79.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
79.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
76.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
75.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
75.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
70.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
67.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
60.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
57.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
56.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
55.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
55.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
51.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
51.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
50.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
50.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
49.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
48.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
45.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
45.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
45.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
42.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
40.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
40.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
39.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
39.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
38.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
38.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
37.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
37.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
33.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
33.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
33.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
31.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
30.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
29.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
29.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
27.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
27.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
23.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
23.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
23.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
22.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
21.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
20.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
18.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
18.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
15.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
14.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
12.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
12.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
12.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
11.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
11.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
9.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
8.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
8.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
8.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
8.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
8.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
6.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
5.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
5.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
5.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
4.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
4.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
4.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
2.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
2.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
2.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
1.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
0.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
0.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
0.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.