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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 384
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 314.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 364.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 485.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 471.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 346.6
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 424.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 513.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 629.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 335.8
Min RPKM: 103.3
Std RPKM: 44.0
Median RPKM: 223.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
335.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
327.9
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
318.8
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
314.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
308.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
302.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
301.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
298.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
298.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
295.0
GTEX-117XS-2026-SM-5GID1
60-69 years, male
293.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
291.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
290.4
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
287.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
287.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
286.4
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
284.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
282.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
281.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
280.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
280.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
278.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
277.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
277.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
274.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
273.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
272.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
269.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
269.0
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
266.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
265.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
261.7
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
261.3
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
259.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
259.4
GTEX-Y111-2426-SM-4TT23
50-59 years, male
259.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
257.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
256.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
256.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
256.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
255.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
255.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
254.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
253.2
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
252.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
251.6
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
250.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
250.5
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
250.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
250.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
249.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
249.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
249.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
246.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
246.3
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
246.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
244.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
244.6
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
244.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
242.8
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
240.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
239.9
GTEX-V955-1926-SM-4KL1L
60-69 years, male
238.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
237.2
GTEX-13111-1526-SM-5EGJX
50-59 years, male
237.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
236.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
236.2
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
235.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
234.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
234.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
233.9
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
233.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
233.4
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
232.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
232.4
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
231.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
230.3
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
230.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
229.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
229.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
228.9
GTEX-XPT6-1626-SM-4B655
20-29 years, male
228.9
GTEX-QLQW-1026-SM-447A9
30-39 years, male
225.7
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
224.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
224.4
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
224.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
222.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
220.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
219.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
218.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
216.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
215.5
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
215.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
214.7
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
214.4
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
212.3
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
211.9
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
211.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
211.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
210.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
209.5
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
208.7
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
208.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
207.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
206.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
206.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
206.1
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
204.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
203.9
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
203.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
203.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
202.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
201.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
200.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
200.8
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
198.7
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
197.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
197.3
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
197.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
195.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
194.8
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
194.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
194.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
193.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
193.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
193.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
192.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
192.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
191.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
191.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
191.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
190.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
190.3
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
188.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
188.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
187.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
187.2
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
187.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
186.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
186.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
186.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
185.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
184.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
183.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
183.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
182.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
181.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
180.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
180.2
GTEX-X261-2326-SM-4PQYU
50-59 years, male
179.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
179.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
178.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
177.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
177.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
171.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
170.9
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
167.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
167.5
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
163.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
160.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
160.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
156.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
155.5
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
154.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
150.2
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
144.4
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
140.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
133.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
133.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
127.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
121.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
103.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.