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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1491.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 946.4
Min RPKM: 116.6
Std RPKM: 190.0
Median RPKM: 528.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
946.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
852.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
844.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
820.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
818.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
811.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
801.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
801.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
796.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
770.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
757.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
747.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
746.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
745.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
742.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
741.7
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
735.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
734.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
728.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
725.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
723.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
720.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
717.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
711.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
711.3
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
694.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
689.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
685.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
676.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
664.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
662.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
647.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
647.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
644.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
632.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
630.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
627.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
625.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
609.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
604.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
598.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
597.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
596.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
596.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
591.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
586.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
582.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
581.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
574.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
571.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
570.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
564.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
559.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
557.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
556.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
531.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
529.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
527.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
523.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
523.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
521.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
514.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
508.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
507.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
504.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
504.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
498.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
488.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
479.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
477.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
465.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
465.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
462.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
451.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
442.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
437.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
421.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
420.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
414.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
410.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
407.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
407.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
406.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
403.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
400.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
396.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
389.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
386.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
381.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
378.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
333.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
330.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
328.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
327.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
314.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
296.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
290.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
274.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
271.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
269.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
240.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
239.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
237.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
237.7
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
236.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
231.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
230.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
225.9
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
190.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
189.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
165.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
134.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
134.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
116.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 654.7
Samples: 108
Max RPKM: 1245.5
Min RPKM: 96.7
Std RPKM: 280.0
Median RPKM: 720.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
1245.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
1106.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
1099.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
1087.0
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
1074.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
1037.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
1028.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
1012.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
995.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
993.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
971.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
966.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
959.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
953.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
935.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
933.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
928.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
928.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
912.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
911.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
908.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
897.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
897.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
894.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
891.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
888.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
878.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
876.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
866.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
866.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
860.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
855.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
847.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
841.7
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
830.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
829.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
821.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
819.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
806.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
805.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
803.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
799.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
794.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
792.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
789.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
776.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
774.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
768.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
756.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
754.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
735.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
730.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
727.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
725.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
714.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
713.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
699.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
696.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
692.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
682.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
648.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
646.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
628.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
619.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
616.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
603.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
599.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
573.3
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
568.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
556.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
552.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
550.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
540.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
535.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
523.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
503.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
488.8
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
479.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
453.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
432.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
425.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
423.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
414.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
409.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
396.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
374.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
372.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
348.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
332.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
319.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
292.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
289.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
279.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
263.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
254.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
243.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
231.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
228.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
192.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
184.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
184.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
182.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
171.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
142.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
120.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
114.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
110.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
96.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.