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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 865.2
Min RPKM: 42.0
Std RPKM: 213.8
Median RPKM: 335.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
865.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
801.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
772.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
768.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
750.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
732.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
730.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
727.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
701.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
693.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
687.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
659.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
632.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
629.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
616.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
612.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
592.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
580.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
573.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
560.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
556.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
550.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
549.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
549.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
545.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
541.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
532.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
531.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
530.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
524.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
521.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
520.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
519.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
496.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
486.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
480.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
479.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
458.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
442.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
441.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
436.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
434.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
431.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
420.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
407.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
402.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
399.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
394.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
392.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
391.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
377.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
371.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
365.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
363.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
352.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
344.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
344.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
342.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
335.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
332.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
309.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
305.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
291.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
289.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
282.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
274.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
261.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
259.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
256.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
245.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
244.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
229.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
228.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
217.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
208.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
205.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
199.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
197.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
195.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
191.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
187.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
184.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
184.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
176.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
171.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
164.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
162.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
160.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
158.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
157.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
154.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
149.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
148.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
148.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
138.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
132.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
130.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
113.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
104.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
104.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
100.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
92.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
87.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
85.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
85.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
85.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
82.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
75.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
70.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
68.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
63.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
62.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
56.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
53.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
50.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
44.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
42.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.