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CCDC107
COLON - Expression summary
RNA expressioni
HPA:19.5TPM
GTEx:30.7RPKM
FANTOM5:61.8Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 19.5
overview Male, age 54 Sample 1
TPM: 24.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 36.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 30.7
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 40.4
Samples: 149

Max RPKM: 64.8
Min RPKM: 11.9
Std RPKM: 8.8
Median RPKM: 40.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 64.8
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 58.8
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 58.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 57.6
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 56.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 56.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 55.6
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 54.3
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 54.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 53.7
Show all
Colon - Transverse
RPKM: 23.3
Samples: 196

Max RPKM: 65.6
Min RPKM: 8.0
Std RPKM: 11.5
Median RPKM: 20.7
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 65.6
GTEX-117YX-0826-SM-5H11J 50-59 years, male 55.2
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 55.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 54.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 51.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 48.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 48.1
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 47.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 46.2
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 46.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 61.8
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 55.0
FF:10014-101C5 62,83,84 years, mixed 61.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.