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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 259.4
Min RPKM: 52.7
Std RPKM: 37.2
Median RPKM: 117.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
259.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
212.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
208.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
207.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
200.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
199.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
195.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
193.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
178.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
173.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
168.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
166.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
164.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
163.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
161.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
158.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
157.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
156.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
154.9
GTEX-QV31-0126-SM-447BP
30-39 years, male
154.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
153.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
151.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
150.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
150.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
149.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
147.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
144.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
143.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
142.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
138.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
138.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
137.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
134.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
131.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
130.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
129.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
129.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
128.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
128.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
127.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
127.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
127.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
127.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
126.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
123.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
121.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
121.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
121.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
119.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
118.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
118.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
117.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
117.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
113.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
113.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
112.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
112.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
111.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
109.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
108.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
108.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
104.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
103.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
103.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
102.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
101.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
100.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
100.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
100.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
100.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
98.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
98.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
98.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
98.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
95.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
95.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
95.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
94.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
94.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
94.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
93.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
93.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
92.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
91.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
90.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
90.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
88.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
87.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
87.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
86.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
85.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
85.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
85.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
84.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
80.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
78.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
78.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
77.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
76.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
75.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
73.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
71.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
67.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
52.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.