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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 208.3
Min RPKM: 33.2
Std RPKM: 42.6
Median RPKM: 112.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
208.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
208.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
204.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
202.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
202.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
198.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
190.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
190.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
189.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
183.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
180.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
174.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
174.0
GTEX-QCQG-0226-SM-48U28
50-59 years, female
173.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
171.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
165.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
164.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
164.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
163.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
161.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
156.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
155.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
155.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
151.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
150.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
147.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
146.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
142.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
140.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
137.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
136.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
136.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
135.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
133.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
130.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
126.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
123.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
123.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
121.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
121.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
121.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
120.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
119.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
118.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
118.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
118.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
117.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
115.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
114.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
113.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
112.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
112.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
112.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
111.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
111.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
110.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
109.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
108.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
107.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
107.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
104.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
104.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
102.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
102.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
101.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
99.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
97.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
97.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
93.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
92.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
92.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
91.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
91.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
91.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
91.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
91.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
90.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
88.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
88.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
86.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
85.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
84.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
84.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
80.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
79.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
78.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
77.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
75.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
74.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
69.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
68.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
65.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
63.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
63.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
62.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
61.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
56.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
55.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
54.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
50.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
39.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
39.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
38.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
33.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.