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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 787.7
Min RPKM: 111.6
Std RPKM: 146.1
Median RPKM: 322.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
787.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
725.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
659.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
646.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
608.5
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
593.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
567.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
555.7
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
545.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
541.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
540.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
538.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
521.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
503.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
503.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
498.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
498.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
494.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
490.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
489.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
478.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
460.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
457.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
452.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
452.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
432.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
429.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
424.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
419.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
419.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
418.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
414.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
413.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
411.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
410.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
408.5
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
391.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
384.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
380.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
373.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
369.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
365.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
365.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
349.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
339.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
339.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
335.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
330.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
322.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
321.5
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
313.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
310.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
309.6
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
297.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
296.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
288.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
286.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
276.0
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
274.5
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
268.8
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
265.2
GTEX-11I78-1926-SM-59878
50-59 years, female
264.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
262.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
259.4
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
257.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
255.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
245.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
239.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
239.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
234.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
234.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
230.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
229.8
GTEX-RU72-2226-SM-46MUE
50-59 years, female
213.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
213.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
210.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
210.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
208.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
204.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
195.8
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
188.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
187.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
184.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
181.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
181.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
177.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
175.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
174.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
174.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
172.2
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
165.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
161.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
160.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
160.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
149.9
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
133.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
111.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.