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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 441.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 73.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 185.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 591.9
Min RPKM: 22.2
Std RPKM: 113.7
Median RPKM: 188.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
591.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
585.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
575.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
562.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
527.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
524.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
520.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
514.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
479.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
472.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
447.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
441.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
409.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
409.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
399.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
376.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
376.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
376.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
375.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
375.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
375.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
374.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
374.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
368.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
361.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
357.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
357.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
356.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
354.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
352.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
341.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
336.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
335.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
332.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
331.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
325.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
324.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
321.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
317.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
309.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
308.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
308.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
306.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
298.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
296.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
295.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
290.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
288.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
282.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
281.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
276.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
273.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
269.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
268.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
266.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
262.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
262.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
262.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
257.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
255.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
253.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
253.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
252.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
252.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
248.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
244.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
243.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
243.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
241.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
238.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
237.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
236.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
233.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
232.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
232.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
231.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
228.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
226.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
223.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
223.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
222.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
221.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
220.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
217.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
214.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
214.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
211.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
211.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
211.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
210.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
209.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
208.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
202.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
201.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
200.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
199.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
199.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
198.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
198.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
198.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
197.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
193.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
193.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
190.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
190.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
189.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
189.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
188.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
187.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
186.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
180.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
180.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
179.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
179.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
178.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
178.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
178.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
176.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
175.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
173.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
172.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
172.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
170.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
167.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
167.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
166.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
164.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
163.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
163.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
160.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
159.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
158.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
156.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
156.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
155.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
155.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
154.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
153.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
152.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
151.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
151.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
149.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
149.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
148.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
147.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
146.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
146.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
144.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
144.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
143.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
143.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
141.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
141.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
140.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
139.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
138.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
138.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
137.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
137.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
136.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
133.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
132.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
130.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
130.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
130.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
129.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
128.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
125.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
124.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
124.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
123.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
122.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
119.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
119.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
118.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
117.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
117.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
115.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
113.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
111.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
110.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
109.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
109.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
108.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
106.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
104.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
103.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
102.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
101.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
99.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
98.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
96.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
95.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
93.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
93.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
90.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
88.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
83.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
83.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
81.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
81.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
78.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
78.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
78.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
76.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
75.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
73.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
71.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
68.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
67.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
67.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
66.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
63.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
22.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.