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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 173.6
Min RPKM: 35.6
Std RPKM: 30.8
Median RPKM: 82.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
173.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
171.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
171.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
168.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
165.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
163.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
161.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
154.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
150.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
143.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
138.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
135.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
135.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
129.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
126.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
126.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
124.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
122.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
120.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
114.4
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
111.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
110.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
107.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
98.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
98.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
96.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
95.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
94.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
93.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
92.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
91.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
91.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
90.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
90.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
88.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
88.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
88.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
88.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
87.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
87.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
87.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
85.9
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
85.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
85.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
84.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
84.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
84.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
83.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
83.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
82.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
82.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
82.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
82.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
79.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
79.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
78.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
78.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
76.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
76.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
76.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
76.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
75.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
75.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
75.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
74.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
74.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
74.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
74.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
73.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
72.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
72.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
72.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
72.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
71.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
71.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
70.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
70.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
70.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
69.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
69.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
68.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
68.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
68.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
67.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
67.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
66.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
66.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
66.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
65.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
65.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
64.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
63.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
63.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
63.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
62.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
59.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
58.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
57.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
55.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
55.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
54.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
49.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
42.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
35.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.