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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1123.1
Min RPKM: 34.7
Std RPKM: 196.7
Median RPKM: 182.0
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1123.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1093.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
665.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
608.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
577.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
574.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
547.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
545.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
540.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
517.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
481.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
465.6
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
446.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
433.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
393.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
391.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
372.9
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
352.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
350.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
340.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
318.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
312.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
297.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
295.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
276.1
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
268.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
268.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
265.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
258.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
249.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
234.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
233.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
223.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
223.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
222.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
221.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
220.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
217.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
216.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
215.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
215.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
209.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
206.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
205.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
204.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
191.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
187.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
184.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
182.0
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
165.8
GTEX-11I78-1926-SM-59878
50-59 years, female
164.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
163.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
150.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
148.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
147.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
147.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
141.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
135.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
135.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
135.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
131.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
131.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
131.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
126.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
124.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
123.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
122.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
119.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
117.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
113.7
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
110.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
101.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
98.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
96.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
95.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
94.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
91.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
90.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
80.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
79.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
75.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
74.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
72.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
69.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
65.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
60.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
57.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
51.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
51.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
49.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
47.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
46.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
46.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
45.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
44.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
38.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
34.7
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.