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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 200.0
Min RPKM: 107.5
Std RPKM: 18.4
Median RPKM: 151.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
200.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
193.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
190.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
189.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
184.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
183.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
183.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
178.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
178.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
177.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
175.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
174.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
171.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
171.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
170.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
168.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
167.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
166.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
166.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
165.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
164.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
163.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
163.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
163.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
163.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
163.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
162.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
162.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
161.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
161.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
160.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
160.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
160.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
160.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
160.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
160.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
160.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
159.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
158.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
158.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
157.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
156.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
156.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
155.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
155.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
155.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
154.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
154.3
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
154.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
152.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
151.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
151.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
151.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
150.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
149.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
149.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
148.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
146.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
146.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
146.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
145.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
145.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
144.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
144.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
144.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
144.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
144.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
142.7
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
142.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
141.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
141.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
140.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
139.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
139.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
139.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
138.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
138.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
138.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
138.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
138.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
137.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
136.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
136.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
135.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
134.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
133.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
132.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
132.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
132.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
130.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
129.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
128.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
127.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
127.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
126.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
125.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
124.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
122.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
122.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
121.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
118.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
118.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
117.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
107.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.