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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 559.2
Min RPKM: 128.3
Std RPKM: 78.4
Median RPKM: 268.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
559.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
480.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
439.0
GTEX-QCQG-1426-SM-48U22
50-59 years, female
434.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
423.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
419.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
411.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
410.6
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
407.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
389.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
388.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
378.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
372.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
372.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
365.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
360.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
357.8
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
354.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
352.7
GTEX-11I78-1926-SM-59878
50-59 years, female
341.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
336.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
335.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
335.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
330.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
327.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
321.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
313.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
309.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
307.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
306.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
302.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
301.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
300.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
297.3
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
297.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
295.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
295.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
294.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
292.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
292.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
290.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
288.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
281.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
278.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
275.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
271.7
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
270.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
268.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
268.9
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
265.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
264.5
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
263.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
262.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
262.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
261.3
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
261.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
254.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
252.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
251.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
251.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
251.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
246.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
243.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
243.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
239.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
236.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
235.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
231.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
230.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
226.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
225.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
222.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
218.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
216.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
213.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
213.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
210.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
208.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
207.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
205.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
204.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
203.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
200.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
197.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
196.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
194.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
193.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
191.7
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
191.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
189.6
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
184.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
179.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
176.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
173.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
158.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
157.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
128.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.