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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 239
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 292.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 136.6
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 231.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 283.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 181
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 16.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 94.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 41.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 380.7
Min RPKM: 111.0
Std RPKM: 52.3
Median RPKM: 239.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
380.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
367.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
359.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
339.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
321.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
320.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
319.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
317.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
316.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
316.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
316.7
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
306.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
302.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
302.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
300.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
298.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
298.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
297.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
294.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
291.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
290.2
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
286.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
285.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
282.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
282.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
280.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
278.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
277.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
277.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
276.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
275.6
GTEX-REY6-0126-SM-48FDT
60-69 years, male
275.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
274.7
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
273.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
272.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
272.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
270.4
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
269.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
268.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
268.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
267.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
264.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
262.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
262.0
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
261.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
261.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
261.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
261.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
260.6
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
260.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
260.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
260.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
259.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
259.2
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
258.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
257.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
257.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
257.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
255.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
255.0
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
254.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
253.3
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
253.1
GTEX-12696-0226-SM-5EGL3
60-69 years, male
252.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
252.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
251.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
250.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
250.8
GTEX-QLQW-1026-SM-447A9
30-39 years, male
250.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
250.1
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
249.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
249.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
248.6
GTEX-117XS-2026-SM-5GID1
60-69 years, male
248.4
GTEX-R55D-0126-SM-48FEL
50-59 years, male
248.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
247.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
247.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
246.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
245.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
244.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
243.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
243.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
242.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
241.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
241.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
239.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
239.9
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
239.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
238.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
238.6
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
236.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
236.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
236.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
235.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
234.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
234.3
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
231.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
230.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
228.8
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
228.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
227.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
226.5
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
225.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
224.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
222.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
221.8
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
220.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
217.5
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
217.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
216.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
216.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
215.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
214.8
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
214.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
214.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
214.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
213.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
213.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
212.2
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
210.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
209.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
208.4
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
207.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
207.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
207.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
207.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
205.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
204.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
202.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
201.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
200.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
198.8
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
197.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
196.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
195.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
191.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
191.4
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
189.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
186.8
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
181.1
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
180.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
177.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
174.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
172.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
172.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
171.1
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
169.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
168.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
168.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
166.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
165.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
164.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
162.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
162.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
161.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
160.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
148.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
146.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
145.7
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
145.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
145.2
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
141.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
139.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
139.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
132.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
132.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
131.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
130.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
126.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
124.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
113.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
111.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.