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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 465.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 287
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 173.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 415.7
Min RPKM: 62.7
Std RPKM: 54.8
Median RPKM: 157.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
415.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
326.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
309.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
296.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
279.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
277.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
275.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
274.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
267.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
266.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
261.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
260.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
256.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
255.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
254.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
248.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
247.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
245.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
244.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
238.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
237.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
231.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
230.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
226.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
225.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
224.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
221.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
220.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
219.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
217.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
217.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
217.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
217.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
216.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
214.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
213.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
212.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
211.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
210.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
210.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
207.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
206.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
206.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
205.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
204.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
203.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
202.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
202.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
200.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
199.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
199.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
197.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
197.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
197.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
197.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
193.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
192.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
191.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
190.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
187.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
185.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
185.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
184.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
184.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
184.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
183.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
183.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
183.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
179.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
179.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
178.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
178.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
177.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
177.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
177.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
176.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
174.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
174.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
173.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
172.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
171.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
170.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
170.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
169.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
168.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
168.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
167.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
167.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
166.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
165.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
165.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
165.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
164.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
163.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
163.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
162.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
162.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
160.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
159.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
159.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
159.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
158.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
158.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
158.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
158.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
157.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
157.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
157.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
156.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
155.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
155.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
155.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
153.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
152.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
152.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
151.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
151.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
150.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
150.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
150.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
150.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
149.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
149.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
146.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
146.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
144.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
144.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
143.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
143.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
142.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
142.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
141.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
140.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
139.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
138.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
138.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
137.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
137.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
137.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
136.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
135.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
135.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
135.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
135.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
134.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
134.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
132.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
132.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
130.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
130.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
130.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
130.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
130.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
128.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
127.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
126.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
126.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
126.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
125.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
124.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
124.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
124.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
123.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
121.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
121.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
120.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
118.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
118.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
116.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
116.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
115.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
114.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
113.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
113.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
112.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
112.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
110.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
110.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
109.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
109.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
108.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
106.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
105.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
105.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
104.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
104.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
99.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
98.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
96.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
96.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
95.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
94.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
94.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
94.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
94.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
93.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
92.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
92.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
91.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
90.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
87.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
86.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
86.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
85.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
82.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
82.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
81.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
79.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
76.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
74.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
69.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
65.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
65.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
62.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.