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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 87.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 173.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 46.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 69.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 189.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 86.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 56.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 45.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 227.1
Min RPKM: 7.9
Std RPKM: 37.7
Median RPKM: 48.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
227.1
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
198.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
189.9
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
160.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
156.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
118.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
118.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
113.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
112.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
108.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
107.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
98.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
97.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
95.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
91.2
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
89.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
88.2
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
88.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
85.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
85.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
84.5
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
80.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
78.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
76.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
76.4
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
75.5
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
73.5
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
73.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
73.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
73.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
72.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
72.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
71.6
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
70.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
70.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
69.8
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
69.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
68.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
67.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
66.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
66.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
64.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
62.6
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
61.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
60.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
60.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
58.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
58.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
56.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
56.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
55.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
55.4
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
52.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
52.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
51.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
51.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
51.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
50.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
49.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
48.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
48.8
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
47.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
47.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
47.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
46.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
45.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
43.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
43.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
43.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
42.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
42.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
42.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
41.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
41.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
41.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
40.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
39.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
39.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
39.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
38.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
36.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
35.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
35.2
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
34.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
34.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
33.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
32.9
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
32.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
31.6
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
31.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
31.1
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
30.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
29.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
28.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
28.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
27.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
26.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
25.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
24.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
24.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
24.0
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
23.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
23.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
22.9
GTEX-RN64-1826-SM-48FDV
50-59 years, male
22.8
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
22.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
22.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
22.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
21.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
20.9
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
17.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
16.7
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
15.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
14.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
14.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
14.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
13.2
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
11.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
7.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
