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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 896.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 413.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 411.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 394.8
Min RPKM: 12.0
Std RPKM: 80.6
Median RPKM: 112.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
394.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
385.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
377.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
352.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
351.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
348.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
319.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
316.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
312.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
289.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
287.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
282.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
275.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
266.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
259.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
246.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
246.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
245.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
245.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
243.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
242.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
238.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
230.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
229.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
227.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
223.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
223.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
223.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
223.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
221.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
219.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
215.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
210.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
209.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
204.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
204.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
201.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
200.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
200.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
199.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
199.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
198.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
198.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
194.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
194.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
184.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
183.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
182.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
181.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
180.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
179.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
176.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
175.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
174.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
173.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
173.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
170.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
170.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
168.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
168.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
167.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
164.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
163.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
161.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
160.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
159.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
158.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
156.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
156.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
155.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
152.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
150.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
149.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
147.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
147.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
146.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
146.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
146.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
146.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
145.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
145.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
144.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
144.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
140.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
136.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
135.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
135.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
132.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
132.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
130.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
130.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
127.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
127.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
126.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
125.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
122.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
121.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
120.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
119.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
116.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
116.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
116.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
115.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
114.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
113.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
112.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
112.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
112.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
111.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
110.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
109.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
108.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
108.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
105.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
105.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
100.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
99.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
99.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
98.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
98.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
97.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
96.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
94.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
93.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
91.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
90.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
90.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
90.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
88.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
88.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
87.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
87.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
86.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
85.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
85.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
84.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
83.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
82.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
82.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
82.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
80.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
80.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
79.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
79.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
79.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
78.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
77.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
77.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
75.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
72.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
72.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
70.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
70.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
69.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
68.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
67.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
66.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
66.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
65.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
65.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
63.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
61.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
61.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
60.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
60.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
60.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
58.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
57.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
56.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
56.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
55.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
55.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
54.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
53.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
51.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
51.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
50.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
50.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
49.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
49.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
45.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
44.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
44.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
44.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
44.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
44.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
44.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
44.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
43.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
42.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
42.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
42.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
42.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
41.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
41.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
41.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
41.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
40.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
40.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
39.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
37.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
37.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
34.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
33.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
33.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
30.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
29.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
28.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
27.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
22.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
13.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
13.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
12.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
12.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.