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SSBP3
COLON - Expression summary
RNA expressioni
HPA:26.3TPM
GTEx:17.2RPKM
FANTOM5:42.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 26.3
overview Male, age 54 Sample 1
TPM: 35.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 32.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 27.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 35
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 23.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 17.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 18.8
Samples: 149

Max RPKM: 27.7
Min RPKM: 10.3
Std RPKM: 3.2
Median RPKM: 18.9
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 27.7
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 26.5
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 25.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 25.0
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 24.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 24.4
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 24.1
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 24.0
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 23.8
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 23.8
Show all
Colon - Transverse
RPKM: 16.0
Samples: 196

Max RPKM: 27.4
Min RPKM: 9.8
Std RPKM: 3.6
Median RPKM: 15.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 27.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 26.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 26.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 26.7
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 25.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 24.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 24.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 24.4
GTEX-S341-1426-SM-4AD6U 40-49 years, female 23.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 23.3
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 42.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 31.9
FF:10014-101C5 62,83,84 years, mixed 42.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.