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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 314.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 406.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 215.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 376.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 370.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 263.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 362.7
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 374.7
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 352.9
Min RPKM: 36.8
Std RPKM: 57.7
Median RPKM: 158.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
352.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
339.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
294.8
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
282.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
271.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
247.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
246.9
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
246.9
GTEX-S33H-1626-SM-4AD68
30-39 years, male
246.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
242.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
237.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
236.7
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
234.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
231.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
228.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
222.8
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
220.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
220.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
219.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
217.5
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
216.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
211.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
208.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
208.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
206.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
206.7
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
203.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
201.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
199.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
197.6
GTEX-P78B-1326-SM-3P611
40-49 years, female
195.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
194.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
190.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
187.7
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
186.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
185.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
184.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
184.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
183.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
183.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
181.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
181.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
179.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
178.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
173.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
173.3
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
171.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
167.7
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
167.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
167.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
166.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
162.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
162.3
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
162.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
162.2
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
160.4
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
159.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
158.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
158.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
158.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
158.0
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
153.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
151.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
150.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
150.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
150.3
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
149.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
148.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
146.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
145.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
144.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
142.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
142.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
141.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
140.2
GTEX-QEL4-1226-SM-447A4
50-59 years, male
139.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
136.5
GTEX-RN64-1826-SM-48FDV
50-59 years, male
135.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
133.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
131.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
128.4
GTEX-X261-1726-SM-4PQYT
50-59 years, male
127.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
125.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
123.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
122.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
122.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
120.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
119.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
117.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
115.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
115.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
115.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
115.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
112.3
GTEX-QESD-2026-SM-447BI
20-29 years, male
112.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
110.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
108.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
105.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
102.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
102.1
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
100.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
98.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
96.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
95.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
95.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
93.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
91.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
91.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
90.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
88.0
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
86.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
86.6
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
83.1
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
81.6
GTEX-11ZUS-2526-SM-59872
30-39 years, male
76.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
70.9
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
57.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
40.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
36.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
