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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 88.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 133.1
Min RPKM: 0.0
Std RPKM: 24.1
Median RPKM: 27.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
133.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
111.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
87.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
81.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
74.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
73.5
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
69.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
68.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
66.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
65.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
60.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
60.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
60.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
60.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
57.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
55.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
55.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
52.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
51.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
51.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
50.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
49.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
49.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
48.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
46.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
46.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
46.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
45.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
43.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
43.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
42.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
42.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
41.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
40.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
40.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
39.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
39.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
38.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
38.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
37.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
37.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
35.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
35.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
34.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
34.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
34.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
34.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
33.5
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
33.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
33.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
33.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
30.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
29.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
29.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
29.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
28.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
28.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
27.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
24.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
23.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
23.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
22.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
22.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
22.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
20.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
19.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
18.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
18.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
16.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
16.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
16.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
15.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
15.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
15.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
14.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
14.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
13.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
13.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
13.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
12.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
12.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
12.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
12.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
12.6
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
12.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
11.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
11.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
11.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
10.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
9.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
9.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
8.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
8.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
8.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
7.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
7.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
7.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
6.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
5.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
5.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
5.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
5.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
4.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
4.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
4.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
4.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
3.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
3.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
3.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
3.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
2.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
1.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
0.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
0.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 32.6
Samples: 108
Max RPKM: 109.0
Min RPKM: 0.7
Std RPKM: 25.6
Median RPKM: 24.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
109.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
103.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
98.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
96.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
79.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
79.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
79.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
73.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
72.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
71.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
71.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
68.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
67.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
66.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
66.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
66.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
66.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
62.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
60.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
59.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
58.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
53.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
53.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
50.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
50.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
49.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
47.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
47.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
46.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
45.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
43.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
42.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
41.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
41.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
41.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
40.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
40.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
40.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
39.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
39.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
38.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
36.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
35.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
35.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
33.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
33.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
33.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
32.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
29.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
29.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
29.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
28.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
26.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
25.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
24.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
23.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
23.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
23.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
22.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
22.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
22.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
21.9
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
19.2
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
18.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
18.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
18.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
17.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
16.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
16.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
16.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
14.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
14.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
14.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
13.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
12.6
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
12.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
12.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
12.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
11.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
11.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
11.5
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
11.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
11.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
10.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
9.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
9.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
9.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
9.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
8.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
8.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
8.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
8.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
7.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
7.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
6.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
6.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
6.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
5.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
4.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
4.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
4.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
3.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
3.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
3.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
2.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
1.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
1.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
0.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.